SNP Profiles matching RB 37

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_Input profile	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
1._RB_37_[BRA]	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
2._RB_37_[BRA]	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
3._RB_37_[BRA]	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
4._RB_37_[BRA]	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
5._RB_37_[BRA]	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
6._RB_37_[BRA]	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
7._RB_37_[BRA]	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
8._RB_37_[BRA]	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
9._GC-01-043-2-20	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
10._GC-01-043-2-20	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
11._GC-01-043-2-20	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
12._GC-01-043-2-20	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
13._GC-01-043-2-20	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
14._GC-01-043-2-20	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
15._GC-01-043-2-20	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
16._GC-01-043-2-20	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
17._GC-01-043-2-20	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
18._RB_37_[BRA]	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
19._GC-01-043-2-20	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	TT	AA
20._RB_39_[BRA]	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	_	AA	TT	AA
21._RB_39_[BRA]	GG	GG	AA	CC	AC	GG	_	CC	CC	_	GG	AA	TT	AA
22._RB_37_[BRA]	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	CC	AA
23._GC-01-043-2-20	GG	GG	AA	CC	AC	GG	GG	CC	CC	AG	GG	AA	CC	AA
24._RB_39_[BRA]	GG	GG	AA	CC	AC	GG	GG	CC	AC	AG	GG	AA	CT	AA
25._GC-01-042-2-19	GG	GG	AA	CC	AC	GG	GG	CC	AC	AG	GG	AA	CT	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
1._RB_37_[BRA]	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
2._RB_37_[BRA]	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
3._RB_37_[BRA]	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
4._RB_37_[BRA]	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
5._RB_37_[BRA]	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
6._RB_37_[BRA]	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
7._RB_37_[BRA]	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
8._RB_37_[BRA]	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
9._GC-01-043-2-20	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
10._GC-01-043-2-20	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
11._GC-01-043-2-20	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
12._GC-01-043-2-20	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
13._GC-01-043-2-20	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
14._GC-01-043-2-20	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
15._GC-01-043-2-20	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
16._GC-01-043-2-20	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
17._GC-01-043-2-20	GG	CC	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
18._RB_37_[BRA]	GG	_	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
19._GC-01-043-2-20	GG	_	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
20._RB_39_[BRA]	_	CC	_	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
21._RB_39_[BRA]	_	CC	TT	GG	CC	AA	GG	TT	TT	GG	_	CC	_	_
22._RB_37_[BRA]	GG	_	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
23._GC-01-043-2-20	GG	_	TT	GG	CC	AA	GG	TT	TT	GG	AA	CC	AA	CC
24._RB_39_[BRA]	GG	_	CT	GG	AC	AA	GG	TT	TT	_	AA	CC	AA	_
25._GC-01-042-2-19	GG	_	CT	GG	AC	AA	GG	TT	TT	_	AA	CC	AA	_

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
1._RB_37_[BRA]	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
2._RB_37_[BRA]	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
3._RB_37_[BRA]	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
4._RB_37_[BRA]	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
5._RB_37_[BRA]	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
6._RB_37_[BRA]	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
7._RB_37_[BRA]	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
8._RB_37_[BRA]	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
9._GC-01-043-2-20	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
10._GC-01-043-2-20	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
11._GC-01-043-2-20	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
12._GC-01-043-2-20	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
13._GC-01-043-2-20	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
14._GC-01-043-2-20	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
15._GC-01-043-2-20	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
16._GC-01-043-2-20	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
17._GC-01-043-2-20	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
18._RB_37_[BRA]	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
19._GC-01-043-2-20	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
20._RB_39_[BRA]	GG	AA	_	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
21._RB_39_[BRA]	GG	AA	_	CT	GG	TT	AA	CT	CC	CC	AA	_	X_X	X_X
22._RB_37_[BRA]	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
23._GC-01-043-2-20	GG	AA	TT	CT	GG	TT	AA	CT	CC	CC	AA	CC	X_X	X_X
24._RB_39_[BRA]	GG	AA	TT	TT	GG	TT	AA	CC	CC	CC	AA	CC	X_X	X_X
25._GC-01-042-2-19	GG	AA	TT	TT	GG	TT	AA	CC	CC	CC	AA	CC	X_X	X_X

Input profile: RB_37_[BRA]

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1216 14 > F

Dapeng Zhang, 2016

1._RB_37_[BRA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1216 1

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

2._RB_37_[BRA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1216 6

Dapeng Zhang, 2016

3._RB_37_[BRA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1216 8

Dapeng Zhang, 2016

4._RB_37_[BRA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1216 10

Dapeng Zhang, 2016

5._RB_37_[BRA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1216 13

Dapeng Zhang, 2016

6._RB_37_[BRA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1216 15

Dapeng Zhang, 2016

7._RB_37_[BRA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1216 11 > F

Dapeng Zhang, 2016

8._RB_37_[BRA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1216 9 > FP

Dapeng Zhang, 2016

9._RB_37_[BRA] GC-01-043-2-20

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

10._RB_37_[BRA] GC-01-043-2-20

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

11._RB_37_[BRA] GC-01-043-2-20

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

12._RB_37_[BRA] GC-01-043-2-20

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9 > FP1

13._RB_37_[BRA] GC-01-043-2-20

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10

14._RB_37_[BRA] GC-01-043-2-20

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 11

Notes: 11 > FP3

15._RB_37_[BRA] GC-01-043-2-20

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 13

Notes: 13

16._RB_37_[BRA] GC-01-043-2-20

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 14

Notes: 14 > FP4

17._RB_37_[BRA] GC-01-043-2-20

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 15

Notes: 15

18._RB_37_[BRA]

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1216 16

Dapeng Zhang, 2016

19._RB_37_[BRA] GC-01-043-2-20

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 16

Notes: 16

20._RB_39_[BRA]

identical
36 shared markers

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Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica

Location: Cabiria

Dapeng Zhang, 2016

21._RB_39_[BRA]

identical
32 shared markers

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Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica

Location: Cabiria

Dapeng Zhang, 2016

22._RB_37_[BRA]

97.4 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1216 2 > FP

Dapeng Zhang, 2016

23._RB_37_[BRA] GC-01-043-2-20

97.4 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

24._RB_39_[BRA]

91.9 %
37 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1215 12 > F

Dapeng Zhang, 2016

25._RB_39_[BRA] GC-01-042-2-19

91.9 %
37 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12 > FP4

Key to SNP Markers

Key to SNP Markers

1	TcSNP872	2	TcSNP723	3	TcSNP645	4	TcSNP619	5	TcSNP591
6	TcSNP577	7	TcSNP560	8	TcSNP534	9	TcSNP529	10	TcSNP469
11	TcSNP429	12	TcSNP372	13	TcSNP242	14	TcSNP230	15	TcSNP226
16	TcSNP193	17	TcSNP151	18	TcSNP150	19	TcSNP144	20	TcSNP32
21	TcSNP25	22	TcSNP891	23	TcSNP917	24	TcSNP929	25	TcSNP953
26	TcSNP994	27	TcSNP998	28	TcSNP1060	29	TcSNP1062	30	TcSNP1075
31	TcSNP1144	32	TcSNP1165	33	TcSNP1253	34	TcSNP1270	35	TcSNP1350
36	TcSNP1414	37	TcSNP1442	38	TcSNP1458	39	TcSNP1484	40	TcSNP1520